| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23688 | 98 | 2.05 | Mlig455_009291, Mlig455_011648, Mlig455_011649, Mlig455_011650, Mlig455_011651, Mlig455_011652, Mlig455_030919, Mlig455_049142, Mlig455_062509, Mlig455_067745 | Neo: Irradiation |
RTL1, ZCCHC13 | Mlig455_009291 {REF} {Length: 4337} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=35.6]; Aspartyl protease [PF13650.8, score=30.5]} {RNA1509_31095} {RNA1310_2124} {RNA815_8382} Mlig455_011648 {REF} {Length: 393} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.1]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=42.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.0]; Aspartyl protease [PF13650.8, score=28.7]; Zinc knuckle [PF00098.25, score=24.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=233, Expect=6e-63]} {RNA1509_34728} {RNA1310_3657} {RNA815_18924} Mlig455_011649 {REF} {Length: 514} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=81.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.2]; Aspartyl protease [PF13650.8, score=30.8]; Zinc knuckle [PF00098.25, score=26.0]} {Human: ENSG00000187969, ZCCHC13, zinc finger CCHC-type containing 13, [Score=48.9, Expect=4e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=121, Expect=3e-28]} {RNA1509_34728} {RNA1310_3657} {RNA815_63204} Mlig455_011650 {REF} {Length: 674} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.8]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=91.7, Expect=3e-21]} {RNA1509_34728} {RNA1310_3657} {RNA815_25691} Mlig455_011651 {REF} {Length: 370} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=70.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=51.3]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=77.0, Expect=4e-18]} {RNA1509_31095} {RNA1310_2124} {RNA815_34721} Mlig455_011652 {REF} {Length: 1023} {Pfam: Integrase zinc binding domain [PF17921.3, score=63.8]; Integrase core domain [PF00665.28, score=48.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=34.6]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=71.2, Expect=2e-13]} {RNA1509_34728} {RNA1310_2124} {RNA815_8382} Mlig455_030919 {REF} {Length: 3647} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=81.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=35.2]; Aspartyl protease [PF13650.8, score=30.8]; Zinc knuckle [PF00098.25, score=26.0]} {Human: ENSG00000187969, ZCCHC13, zinc finger CCHC-type containing 13, [Score=48.9, Expect=4e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=121, Expect=3e-28]} {RNA1509_34728} {RNA1310_3657} {RNA815_8382} Mlig455_049142 {REF} {Length: 4308} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.1]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=42.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.0]; Aspartyl protease [PF13650.8, score=28.7]; Zinc knuckle [PF00098.25, score=24.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=233, Expect=6e-63]} {RNA1509_31095} {RNA1310_2124} {RNA815_8382} Mlig455_062509 {REF} {Length: 495} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.1]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=42.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.0]; Aspartyl protease [PF13650.8, score=28.7]; Zinc knuckle [PF00098.25, score=24.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=4e-08]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=233, Expect=6e-63]} {RNA1509_34728} {RNA1310_3657} {RNA815_8382} Mlig455_067745 {REF} {Length: 4357} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.2]; Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=44.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.1]; Aspartyl protease [PF13650.8, score=28.7]; Zinc knuckle [PF00098.25, score=24.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=5e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=5e-08]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=233, Expect=1e-62]} {RNA1509_31095, RNA1509_34728} {RNA1310_2124, RNA1509_31095, RNA1509_34728} {RNA1509_31095, RNA1509_34728, RNA815_8382} |