| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28366 | 307 | 6.40 | Mlig455_065787, Mlig455_067531 | Neo: Int S/G2/M Age: Up-Down-Down |
RTL1 | Mlig455_065787 {REF} {Length: 9629} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.1]; 'Cold-shock' DNA-binding domain [PF00313.24, score=30.5]; Aspartyl protease [PF13650.8, score=22.1]; Zinc knuckle [PF13696.8, score=22.1]; Zinc knuckle [PF00098.25, score=21.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.5]; Aspartyl protease [PF09668.12, score=20.6]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=125, Expect=6e-30]} {RNA1509_4878} {RNA1310_542.1, RNA1509_4878} {RNA1509_4878, RNA815_66.1} Mlig455_067531 {REF} {Length: 9936} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.2]; Integrase core domain [PF00665.28, score=47.0]; Integrase zinc binding domain [PF17921.3, score=36.9]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.1]; Zinc knuckle [PF13696.8, score=21.3]; Zinc knuckle [PF00098.25, score=20.9]; Aspartyl protease [PF13650.8, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]; H2C2 zinc finger [PF09337.12, score=19.7]; Aspartyl protease [PF09668.12, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=3e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=317, Expect=2e-94]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} |