| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28500 | 67 | 1.39 | Mlig455_002066, Mlig455_002067, Mlig455_050053 | Neo: - Age: logFC(26M/2M)=-0.477 |
RTL1 | Mlig455_002066 {REF} {Length: 1318} {Pfam: Integrase core domain [PF00665.28, score=36.4]} {Smed: dd_Smed_v6_45837_0_2, dd_Smed_v6_45837_0_2, [Score=55.1, Expect=1e-09]} {RNA1509_4878} {RNA1310_542.1} {RNA815_7586} Mlig455_002067 {REF} {Length: 5099} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.8]; Integrase zinc binding domain [PF17921.3, score=37.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.6]; Zinc knuckle [PF13696.8, score=21.7]; Aspartyl protease [PF13650.8, score=21.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.4]; Zinc knuckle [PF00098.25, score=21.3]; Aspartyl protease [PF09668.12, score=21.1]; H2C2 zinc finger [PF09337.12, score=20.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=98.2, Expect=8e-20]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=318, Expect=5e-95]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} Mlig455_050053 {REF} {Length: 8908} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]; Integrase core domain [PF00665.28, score=46.4]; Integrase zinc binding domain [PF17921.3, score=36.9]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.1]; Zinc knuckle [PF13696.8, score=21.3]; Zinc knuckle [PF00098.25, score=20.8]; Aspartyl protease [PF13650.8, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]; H2C2 zinc finger [PF09337.12, score=19.7]; Aspartyl protease [PF09668.12, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=4e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=317, Expect=3e-94]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} |