M.lignano TomoSeq data search

Data search

Found 1 result for MligTC455_30698.

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
1.	MligTC455_30698	7	0.15	Mlig455_026432, Mlig455_027210, Mlig455_044754, Mlig455_052991, Mlig455_058311, Mlig455_061574	Neo: - Age: Down-Up-Down	NYNRIN	Mlig455_026432 {REF} {Length: 4073} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_027210 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.8]; Integrase zinc binding domain [PF17921.3, score=67.9]; Integrase core domain [PF00665.28, score=51.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=27.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.9, Expect=4e-19]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=2e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_044754 {REF} {Length: 3515} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=28.0]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=366, Expect=8e-114]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_052991 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_058311 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_061574 {REF} {Length: 3935} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.8]; Integrase zinc binding domain [PF17921.3, score=67.9]; Integrase core domain [PF00665.28, score=51.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=424, Expect=4e-129]} {RNA1509_30575} {RNA1310_870} {RNA815_993.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30698

0.15

Mlig455_026432, Mlig455_027210, Mlig455_044754, Mlig455_052991, Mlig455_058311, Mlig455_061574

Neo: -

Age: Down-Up-Down

NYNRIN

Mlig455_026432 {REF} {Length: 4073} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_027210 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.8]; Integrase zinc binding domain [PF17921.3, score=67.9]; Integrase core domain [PF00665.28, score=51.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=27.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.9, Expect=4e-19]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=2e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_044754 {REF} {Length: 3515} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=28.0]} {Smed: dd_Smed_v6_1574_6_40, dd_Smed_v6_1574_6_40, [Score=366, Expect=8e-114]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_052991 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_058311 {REF} {Length: 3872} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=6e-140]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_061574 {REF} {Length: 3935} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.8]; Integrase zinc binding domain [PF17921.3, score=67.9]; Integrase core domain [PF00665.28, score=51.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.3]; Aspartyl protease [PF13650.8, score=27.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=424, Expect=4e-129]} {RNA1509_30575} {RNA1310_870} {RNA815_993.1}

Data search

Found 1 result for *MligTC455_30698*.

Found 1 result for MligTC455_30698.