Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|---|
1. | MligTC455_38529 | 1340 | 27.92 | Mlig455_054388 | Neo: - Age: Up-Down-Down |
SMARCA4 | Mlig455_054388 {REF} {Length: 6972} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=260.7]; Helicase conserved C-terminal domain [PF00271.33, score=74.3]; Bromodomain [PF00439.27, score=70.1]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=53.3]; HSA [PF07529.15, score=47.6]; BRK domain [PF07533.18, score=44.2]; Type III restriction enzyme, res subunit [PF04851.17, score=40.7]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1372, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1358, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1376, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1361, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1329, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1174, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1345, Expect=0.0]} {RNA1509_12159, RNA1509_2390} {RNA1310_337.1, RNA1509_12159, RNA1509_2390} {RNA1509_12159, RNA1509_2390, RNA815_1095.1} |