Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|---|
1. | MligTC455_47417 | 12 | 0.24 | Mlig455_010975, Mlig455_015444, Mlig455_056982, Mlig455_069733 | Neo: - Age: Down-Up-Down |
RTL1 | Mlig455_010975 {REF} {Length: 830} {Pfam: Integrase core domain [PF00665.28, score=44.9]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=2e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595} Mlig455_015444 {REF} {Length: 5668} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=64.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.8]; Integrase core domain [PF00665.28, score=43.9]; Zinc knuckle [PF00098.25, score=21.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.2, Expect=2e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=294, Expect=6e-83]} {RNA1509_33291} {RNA1310_923.1, RNA1509_33291} {RNA1509_33291, RNA815_1595} Mlig455_056982 {REF} {Length: 650} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595} Mlig455_069733 {REF} {Length: 1166} {Pfam: Integrase core domain [PF00665.28, score=45.8]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]} {RNA1509_49419} {RNA1310_1940.1} {RNA815_1595} |