TomoSeq data search

Data search

Results for MligTC455_04475

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04475	38	0.78	Mlig455_039634	Neo: - Age: Up-Down-Up	HMCN1	Mlig455_039634 {REF} {Length: 3737} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=401.3]; Spondin-like TSP1 domain [PF19028.2, score=340.8]; Thrombospondin type 1 domain [PF19030.2, score=124.9]; Scavenger receptor cysteine-rich domain [PF00530.20, score=57.5]; CCN3 Nov like TSP1 domain [PF19035.2, score=47.6]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=293, Expect=2e-80]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=290, Expect=2e-79]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=160, Expect=1e-39]} {Celegans: WBGene00016468, C36B7.5, [RH, Score=200, Expect=6e-52]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=266, Expect=3e-72]} {RNA1509_12135} {RNA1310_3277} {RNA815_5276}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04475

0.78

Mlig455_039634

Neo: -

Age: Up-Down-Up

HMCN1

Mlig455_039634 {REF} {Length: 3737} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=401.3]; Spondin-like TSP1 domain [PF19028.2, score=340.8]; Thrombospondin type 1 domain [PF19030.2, score=124.9]; Scavenger receptor cysteine-rich domain [PF00530.20, score=57.5]; CCN3 Nov like TSP1 domain [PF19035.2, score=47.6]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=293, Expect=2e-80]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=290, Expect=2e-79]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=160, Expect=1e-39]} {Celegans: WBGene00016468, C36B7.5, [RH, Score=200, Expect=6e-52]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=266, Expect=3e-72]} {RNA1509_12135} {RNA1310_3277} {RNA815_5276}

Cumulative graph for MligTC455_04475

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_04475

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation