TomoSeq data search

Data search

Results for MligTC455_05179

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_05179	12	0.25	Mlig455_003948, Mlig455_003965, Mlig455_005980	Neo: - Age: -	ARHGAP19, ARHGAP19-SLIT1	Mlig455_003948 {REF} {Length: 2461} {Pfam: RhoGAP domain [PF00620.29, score=84.5]} {Human: ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=75.1, Expect=2e-13]; ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=1e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=71.2, Expect=1e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=68.9, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=68.6, Expect=1e-11]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=62.4, Expect=4e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=69.3, Expect=5e-12]} {RNA1310_57147} {RNA815_45427} Mlig455_003965 {REF} {Length: 2180} {Pfam: RhoGAP domain [PF00620.29, score=84.6]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=75.1, Expect=1e-13]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=1e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=70.9, Expect=2e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=74.7, Expect=2e-13]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=62.4, Expect=4e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=69.3, Expect=4e-12]} {RNA1310_57147} {RNA815_45427} Mlig455_005980 {REF} {Length: 2972} {Pfam: RhoGAP domain [PF00620.29, score=84.2]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=76.6, Expect=5e-14]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=76.3, Expect=7e-14]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=2e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=70.1, Expect=4e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=70.1, Expect=5e-12]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=68.9, Expect=6e-12]} {RNA1310_57147} {RNA815_45427}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05179

0.25

Mlig455_003948, Mlig455_003965, Mlig455_005980

Neo: -

Age: -

ARHGAP19, ARHGAP19-SLIT1

Mlig455_003948 {REF} {Length: 2461} {Pfam: RhoGAP domain [PF00620.29, score=84.5]} {Human: ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=75.1, Expect=2e-13]; ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=1e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=71.2, Expect=1e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=68.9, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=68.6, Expect=1e-11]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=62.4, Expect=4e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=69.3, Expect=5e-12]} {RNA1310_57147} {RNA815_45427}

Mlig455_003965 {REF} {Length: 2180} {Pfam: RhoGAP domain [PF00620.29, score=84.6]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=75.1, Expect=1e-13]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=1e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=70.9, Expect=2e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=74.7, Expect=2e-13]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=62.4, Expect=4e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=69.3, Expect=4e-12]} {RNA1310_57147} {RNA815_45427}

Mlig455_005980 {REF} {Length: 2972} {Pfam: RhoGAP domain [PF00620.29, score=84.2]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=76.6, Expect=5e-14]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=76.3, Expect=7e-14]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=71.6, Expect=2e-12]; ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=70.1, Expect=4e-12]; ENSMUSG00000035697, Arhgap45, Rho GTPase activating protein 45, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=70.1, Expect=5e-12]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_9330_0_1, dd_Smed_v6_9330_0_1, [Score=68.9, Expect=6e-12]} {RNA1310_57147} {RNA815_45427}

Cumulative graph for MligTC455_05179

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_05179

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation