TomoSeq data search

Data search

Results for MligTC455_05390

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_05390	0	0	Mlig455_064373	Neo: - Age: -	COL6A1	Mlig455_064373 {REF} {Length: 2227} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=98.8]} {Human: ENSG00000142156, COL6A1, collagen type VI alpha 1 chain, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000001119, Col6a1, collagen, type VI, alpha 1, [Score=102, Expect=5e-22]} {Celegans: WBGene00003057, lon-3, Cuticle collagen lon-3, [Score=71.6, Expect=2e-13]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=89.4, Expect=2e-18]} {RNA1310_80578}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05390

Mlig455_064373

Neo: -

Age: -

COL6A1

Mlig455_064373 {REF} {Length: 2227} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=98.8]} {Human: ENSG00000142156, COL6A1, collagen type VI alpha 1 chain, [Score=83.6, Expect=5e-16]} {Mouse: ENSMUSG00000001119, Col6a1, collagen, type VI, alpha 1, [Score=102, Expect=5e-22]} {Celegans: WBGene00003057, lon-3, Cuticle collagen lon-3, [Score=71.6, Expect=2e-13]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=89.4, Expect=2e-18]} {RNA1310_80578}

Cumulative graph for MligTC455_05390

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_05390

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation