Data search


search
Exact
Search

Results for MligTC455_06081

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06081 3 0.06 Mlig455_011922

Neo: -

Age: -

GRIK3 Mlig455_011922 {REF} {Length: 3314} {Pfam: Ligand-gated ion channel [PF00060.28, score=185.6]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=108.1]; Receptor family ligand binding region [PF01094.30, score=103.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=80.2]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=576, Expect=0.0]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=575, Expect=0.0]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=557, Expect=0.0]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=575, Expect=0.0]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=570, Expect=0.0]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=559, Expect=0.0]} {Dmel: FBgn0039927, CG11155, [RH, Score=597, Expect=0.0]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=411, Expect=6e-129]} {Smed: dd_Smed_v6_4267_0_6, dd_Smed_v6_4267_0_6, [Score=486, Expect=4e-156]} {RNA1509_24054} {RNA1310_4432} {RNA815_4162}

Cumulative graph for MligTC455_06081

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_06081

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA