TomoSeq data search

Data search

Results for MligTC455_06264

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_06264	0	0.01	Mlig455_069055	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.604	MMP19	Mlig455_069055 {REF} {Length: 1964} {Pfam: Putative peptidoglycan binding domain [PF01471.20, score=23.1]; Matrixin [PF00413.26, score=19.5]} {Human: ENSG00000123342, MMP19, matrix metallopeptidase 19, [Score=50.1, Expect=4e-06]; ENSG00000278843, MMP28, matrix metallopeptidase 28, [Score=49.3, Expect=1e-05]; ENSG00000271447, MMP28, matrix metallopeptidase 28, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=58.2, Expect=1e-08]} {RNA1509_52912} {RNA1310_43864} {RNA815_50780}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_06264

0.01

Mlig455_069055

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.604

MMP19

Mlig455_069055 {REF} {Length: 1964} {Pfam: Putative peptidoglycan binding domain [PF01471.20, score=23.1]; Matrixin [PF00413.26, score=19.5]} {Human: ENSG00000123342, MMP19, matrix metallopeptidase 19, [Score=50.1, Expect=4e-06]; ENSG00000278843, MMP28, matrix metallopeptidase 28, [Score=49.3, Expect=1e-05]; ENSG00000271447, MMP28, matrix metallopeptidase 28, [Score=49.3, Expect=1e-05]} {Mouse: ENSMUSG00000030981, Mmp21, matrix metallopeptidase 21, [Score=58.2, Expect=1e-08]} {RNA1509_52912} {RNA1310_43864} {RNA815_50780}

Cumulative graph for MligTC455_06264

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_06264

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation