TomoSeq data search

Data search

Results for MligTC455_07607

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_07607	2	0.05	Mlig455_016866	Neo: Irradiation Age: Up-Down-Down	A1CF	Mlig455_016866 {REF} {Length: 5949} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=130.5]; RNA recognition motif [PF16367.7, score=23.0]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=438, Expect=1e-148]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=427, Expect=1e-144]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=416, Expect=4e-141]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=2e-108]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=271, Expect=2e-84]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=438, Expect=3e-148]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_07607

0.05

Mlig455_016866

Neo: Irradiation

Age: Up-Down-Down

A1CF

Mlig455_016866 {REF} {Length: 5949} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=130.5]; RNA recognition motif [PF16367.7, score=23.0]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=438, Expect=1e-148]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=427, Expect=1e-144]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=416, Expect=4e-141]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=2e-108]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=271, Expect=2e-84]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=438, Expect=3e-148]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1}

Cumulative graph for MligTC455_07607

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_07607

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation