TomoSeq data search

Data search

Results for MligTC455_08239

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_08239	1	0.01	Mlig455_050874	Neo: - Age: -		Mlig455_050874 {REF} {Length: 2165} {Pfam: Integrase core domain [PF00665.28, score=47.3]; Integrase zinc binding domain [PF17921.3, score=38.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=35.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=50.4, Expect=9e-06]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=90.9, Expect=6e-20]} {RNA1509_51271} {RNA1310_35131} {RNA815_49387}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08239

0.01

Mlig455_050874

Neo: -

Age: -

Mlig455_050874 {REF} {Length: 2165} {Pfam: Integrase core domain [PF00665.28, score=47.3]; Integrase zinc binding domain [PF17921.3, score=38.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=35.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=50.4, Expect=9e-06]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=90.9, Expect=6e-20]} {RNA1509_51271} {RNA1310_35131} {RNA815_49387}

Cumulative graph for MligTC455_08239

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_08239

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation