TomoSeq data search

Data search

Results for MligTC455_09517

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_09517	0	0	Mlig455_031597	Neo: - Age: -	GRID1	Mlig455_031597 {REF} {Length: 2443} {Pfam: Ligand-gated ion channel [PF00060.28, score=106.0]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=85.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=68.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=170, Expect=9e-44]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=170, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=216, Expect=3e-59]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=225, Expect=4e-64]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=274, Expect=3e-80]} {RNA1310_42296} {RNA815_9112}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_09517

Mlig455_031597

Neo: -

Age: -

GRID1

Mlig455_031597 {REF} {Length: 2443} {Pfam: Ligand-gated ion channel [PF00060.28, score=106.0]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=85.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=68.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=170, Expect=9e-44]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=170, Expect=1e-43]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=216, Expect=3e-59]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [Score=225, Expect=4e-64]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=274, Expect=3e-80]} {RNA1310_42296} {RNA815_9112}

Cumulative graph for MligTC455_09517

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_09517

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation