TomoSeq data search

Data search

Results for MligTC455_10094

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10094	16	0.34	Mlig455_014513	Neo: - Age: -		Mlig455_014513 {REF} {Length: 4930} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=107.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.3]; Integrase zinc binding domain [PF17921.3, score=56.2]; Retrotransposon gag protein [PF03732.19, score=23.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]; H2C2 zinc finger [PF09337.12, score=21.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=119, Expect=6e-31]} {RNA1509_48082} {RNA1310_29350} {RNA815_54574}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10094

0.34

Mlig455_014513

Neo: -

Age: -

Mlig455_014513 {REF} {Length: 4930} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=107.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.3]; Integrase zinc binding domain [PF17921.3, score=56.2]; Retrotransposon gag protein [PF03732.19, score=23.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]; H2C2 zinc finger [PF09337.12, score=21.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=119, Expect=6e-31]} {RNA1509_48082} {RNA1310_29350} {RNA815_54574}

Cumulative graph for MligTC455_10094

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.698	0.596	1.00000	1.00000
RegionR2	1.629	0.596	0.99997	1.00000
RegionR3	2.085	0.596	0.03676	0.33382
RegionR4	1.017	0.596	1.00000	1.00000
RegionR5	-1.394	0.596	1.00000	1.00000
RegionR6	-0.436	0.596	1.00000	1.00000
RegionR7	-0.993	0.596	1.00000	1.00000
RegionR8	-1.208	0.596	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.86	0.596	1.00000	1.00000
RegenerationR2	0.626	0.596	0.99989	1.00000
RegenerationR3	-0.339	0.596	1.00000	1.00000
RegenerationR4	-1.514	0.596	1.00000	1.00000
RegenerationR5	1.509	0.596	0.99978	1.00000
RegenerationR6	1.583	0.596	0.99984	1.00000
RegenerationBL	1.41	0.596	0.99990	1.00000
RegenerationTP	1.737	0.596	0.99990	1.00000

Genes with expression patterns similar to MligTC455_10094

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation