TomoSeq data search

Data search

Results for MligTC455_10798

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10798	0	0.00	Mlig455_028461	Neo: - Age: -	OPN4	Mlig455_028461 {REF} {Length: 1052} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=78.4]} {Human: ENSG00000122375, OPN4, opsin 4, [Score=61.2, Expect=9e-10]} {Mouse: ENSMUSG00000021799, Opn4, opsin 4 (melanopsin), [Score=51.6, Expect=9e-07]} {Dmel: FBgn0004842, RYa-R, RYamide receptor, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_15439_0_1, dd_Smed_v6_15439_0_1, [Score=63.5, Expect=3e-11]} {RNA1310_74128} {RNA815_11771}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10798

0.00

Mlig455_028461

Neo: -

Age: -

OPN4

Mlig455_028461 {REF} {Length: 1052} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=78.4]} {Human: ENSG00000122375, OPN4, opsin 4, [Score=61.2, Expect=9e-10]} {Mouse: ENSMUSG00000021799, Opn4, opsin 4 (melanopsin), [Score=51.6, Expect=9e-07]} {Dmel: FBgn0004842, RYa-R, RYamide receptor, [Score=50.1, Expect=2e-06]} {Smed: dd_Smed_v6_15439_0_1, dd_Smed_v6_15439_0_1, [Score=63.5, Expect=3e-11]} {RNA1310_74128} {RNA815_11771}

Cumulative graph for MligTC455_10798

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_10798

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation