TomoSeq data search

Data search

Results for MligTC455_11454

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11454	0	0	Mlig455_000654	Neo: - Age: -	NYNRIN	Mlig455_000654 {REF} {Length: 2975} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=60.8]; Integrase core domain [PF00665.28, score=53.4]; Integrase zinc binding domain [PF17921.3, score=51.6]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=69.7, Expect=3e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=78.2, Expect=5e-14]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=213, Expect=2e-59]} {RNA1310_123606} {RNA815_62683}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11454

Mlig455_000654

Neo: -

Age: -

NYNRIN

Mlig455_000654 {REF} {Length: 2975} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=60.8]; Integrase core domain [PF00665.28, score=53.4]; Integrase zinc binding domain [PF17921.3, score=51.6]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=69.7, Expect=3e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=78.2, Expect=5e-14]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=213, Expect=2e-59]} {RNA1310_123606} {RNA815_62683}

Cumulative graph for MligTC455_11454

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_11454

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation