TomoSeq data search

Data search

Results for MligTC455_11637

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11637	2	0.05	Mlig455_007919	Neo: - Age: -		Mlig455_007919 {REF} {Length: 4521} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; Integrase zinc binding domain [PF17921.3, score=59.4]; Integrase core domain [PF00665.28, score=51.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.0]; Integrase core domain [PF13683.8, score=27.1]; H2C2 zinc finger [PF09337.12, score=18.8]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.4, Expect=3e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=242, Expect=1e-67]} {RNA1509_48809} {RNA1310_22095} {RNA815_36081}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11637

0.05

Mlig455_007919

Neo: -

Age: -

Mlig455_007919 {REF} {Length: 4521} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; Integrase zinc binding domain [PF17921.3, score=59.4]; Integrase core domain [PF00665.28, score=51.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.0]; Integrase core domain [PF13683.8, score=27.1]; H2C2 zinc finger [PF09337.12, score=18.8]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.4, Expect=3e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=242, Expect=1e-67]} {RNA1509_48809} {RNA1310_22095} {RNA815_36081}

Cumulative graph for MligTC455_11637

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_11637

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation