TomoSeq data search

Data search

Results for MligTC455_11639

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11639	1	0.02	Mlig455_018884	Neo: - Age: Up-Down-Down		Mlig455_018884 {REF} {Length: 3453} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=94.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.6]; Zinc knuckle [PF00098.25, score=27.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.1]; Aspartyl protease [PF13650.8, score=22.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=234, Expect=7e-64]} {RNA1509_48809} {RNA1310_22095} {RNA815_36081}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11639

0.02

Mlig455_018884

Neo: -

Age: Up-Down-Down

Mlig455_018884 {REF} {Length: 3453} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=94.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.6]; Zinc knuckle [PF00098.25, score=27.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.1]; Aspartyl protease [PF13650.8, score=22.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=234, Expect=7e-64]} {RNA1509_48809} {RNA1310_22095} {RNA815_36081}

Cumulative graph for MligTC455_11639

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_11639

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation