TomoSeq data search

Data search

Results for MligTC455_12686

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12686	15	0.31	Mlig455_016771	Neo: - Age: Up-Down-Down	CACNA1C	Mlig455_016771 {REF} {Length: 6861} {Pfam: Ion transport protein [PF00520.33, score=826.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=57.9]; Polycystin cation channel [PF08016.14, score=23.8]} {Human: ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1587, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1587, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=1519, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [RH, Score=1556, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=1676, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=1570, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_29, dd_Smed_v6_8899_0_29, [Score=1697, Expect=0.0]} {RNA1509_7565} {RNA1310_546.2} {RNA815_5013}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12686

0.31

Mlig455_016771

Neo: -

Age: Up-Down-Down

CACNA1C

Mlig455_016771 {REF} {Length: 6861} {Pfam: Ion transport protein [PF00520.33, score=826.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=57.9]; Polycystin cation channel [PF08016.14, score=23.8]} {Human: ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1587, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=1587, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=1519, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [RH, Score=1556, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=1676, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=1570, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_29, dd_Smed_v6_8899_0_29, [Score=1697, Expect=0.0]} {RNA1509_7565} {RNA1310_546.2} {RNA815_5013}

Cumulative graph for MligTC455_12686

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.483	0.622	1.00000	1.00000
RegionR2	1.379	0.622	0.99963	1.00000
RegionR3	1.635	0.622	1.00000	1.00000
RegionR4	-0.541	0.622	0.99983	1.00000
RegionR5	-0.782	0.622	0.99993	1.00000
RegionR6	-1.755	0.622	0.99995	1.00000
RegionR7	-1.069	0.622	0.99994	1.00000
RegionR8	0.651	0.622	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.845	0.622	1.00000	1.00000
RegenerationR2	-1.2	0.622	0.09353	0.48735
RegenerationR3	-2.57	0.622	0.99960	1.00000
RegenerationR4	-1.769	0.622	0.99992	1.00000
RegenerationR5	-1.719	0.622	0.99993	1.00000
RegenerationR6	1.47	0.622	1.00000	1.00000
RegenerationBL	2.103	0.622	0.99968	1.00000
RegenerationTP	-1.538	0.622	0.99995	1.00000

Genes with expression patterns similar to MligTC455_12686

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation