TomoSeq data search

Data search

Results for MligTC455_13108

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13108	0	0.01	Mlig455_038664	Neo: - Age: Up-Down-Up	PCDH1	Mlig455_038664 {REF} {Length: 3565} {Pfam: Cadherin domain [PF00028.19, score=274.5]; Cadherin-like [PF08266.14, score=48.6]; Cadherin-like [PF16184.7, score=20.9]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=236, Expect=1e-63]; ENSG00000184226, PCDH9, protocadherin 9, [Score=227, Expect=2e-60]; ENSG00000253485, PCDHGA5, protocadherin gamma subfamily A, 5, [Score=225, Expect=2e-60]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=236, Expect=1e-63]} {Dmel: FBgn0001075, ft, fat, [Score=218, Expect=3e-57]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=147, Expect=2e-35]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=249, Expect=4e-69]} {RNA1509_52197} {RNA1310_8896} {RNA815_28022}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13108

0.01

Mlig455_038664

Neo: -

Age: Up-Down-Up

PCDH1

Mlig455_038664 {REF} {Length: 3565} {Pfam: Cadherin domain [PF00028.19, score=274.5]; Cadherin-like [PF08266.14, score=48.6]; Cadherin-like [PF16184.7, score=20.9]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=236, Expect=1e-63]; ENSG00000184226, PCDH9, protocadherin 9, [Score=227, Expect=2e-60]; ENSG00000253485, PCDHGA5, protocadherin gamma subfamily A, 5, [Score=225, Expect=2e-60]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=236, Expect=1e-63]} {Dmel: FBgn0001075, ft, fat, [Score=218, Expect=3e-57]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=147, Expect=2e-35]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=249, Expect=4e-69]} {RNA1509_52197} {RNA1310_8896} {RNA815_28022}

Cumulative graph for MligTC455_13108

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_13108

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation