TomoSeq data search

Data search

Results for MligTC455_15203

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15203	9	0.19	Mlig455_033094	Neo: - Age: Up-Down-Down	COL4A6	Mlig455_033094 {REF} {Length: 7834} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=577.3]; C-terminal tandem repeated domain in type 4 procollagen [PF01413.21, score=187.7]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [Score=451, Expect=1e-129]} {Mouse: ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=437, Expect=4e-125]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=437, Expect=4e-125]; ENSMUSG00000031503, Col4a2, collagen, type IV, alpha 2, [Score=429, Expect=3e-122]} {Dmel: FBgn0016075, vkg, viking, [Score=622, Expect=0.0]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=535, Expect=1e-157]} {Smed: dd_Smed_v6_1579_0_1, dd_Smed_v6_1579_0_1, [Score=768, Expect=0.0]} {RNA1509_2248} {RNA1310_647.1} {RNA815_210}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15203

0.19

Mlig455_033094

Neo: -

Age: Up-Down-Down

COL4A6

Mlig455_033094 {REF} {Length: 7834} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=577.3]; C-terminal tandem repeated domain in type 4 procollagen [PF01413.21, score=187.7]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [Score=451, Expect=1e-129]} {Mouse: ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=437, Expect=4e-125]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=437, Expect=4e-125]; ENSMUSG00000031503, Col4a2, collagen, type IV, alpha 2, [Score=429, Expect=3e-122]} {Dmel: FBgn0016075, vkg, viking, [Score=622, Expect=0.0]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=535, Expect=1e-157]} {Smed: dd_Smed_v6_1579_0_1, dd_Smed_v6_1579_0_1, [Score=768, Expect=0.0]} {RNA1509_2248} {RNA1310_647.1} {RNA815_210}

Cumulative graph for MligTC455_15203

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_15203

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation