TomoSeq data search

Data search

Results for MligTC455_16073

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16073	5	0.10	Mlig455_008309	Neo: - Age: -		Mlig455_008309 {REF} {Length: 3075} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=38.8]; Aspartyl protease [PF13650.8, score=29.1]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=271, Expect=2e-81]} {RNA1509_52345} {RNA1310_6512.1} {RNA815_24560}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16073

0.10

Mlig455_008309

Neo: -

Age: -

Mlig455_008309 {REF} {Length: 3075} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=74.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=38.8]; Aspartyl protease [PF13650.8, score=29.1]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=271, Expect=2e-81]} {RNA1509_52345} {RNA1310_6512.1} {RNA815_24560}

Cumulative graph for MligTC455_16073

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_16073

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation