Data search


search
Exact
Search

Results for MligTC455_19345

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19345 8 0.16 Mlig455_011851

Neo: -

Age: logFC(26M/2M)=-0.518

TRPM3 Mlig455_011851 {REF} {Length: 4776} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.6]; Ankyrin repeats (many copies) [PF13637.8, score=50.4]; Ankyrin repeat [PF13606.8, score=45.6]; Ankyrin repeats (many copies) [PF13857.8, score=38.3]; Ankyrin repeat [PF00023.32, score=31.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=76.6, Expect=3e-13]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.9, Expect=2e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.9, Expect=2e-12]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=76.6, Expect=2e-13]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.7, Expect=8e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=54.7, Expect=5e-07]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=93.2, Expect=6e-19]} {RNA1509_47152} {RNA1310_3124} {RNA815_446.1}

Cumulative graph for MligTC455_19345

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_19345

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA