TomoSeq data search

Data search

Results for MligTC455_20825

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20825	0	0.00	Mlig455_049922	Neo: - Age: -	NYNRIN	Mlig455_049922 {REF} {Length: 1377} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=72.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=43.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=41.3]; Integrase core domain [PF00665.28, score=30.0]; Integrase core domain [PF13683.8, score=20.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.2, Expect=7e-10]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=130, Expect=1e-34]} {RNA1509_52470} {RNA1310_7413} {RNA815_52703}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20825

0.00

Mlig455_049922

Neo: -

Age: -

NYNRIN

Mlig455_049922 {REF} {Length: 1377} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=72.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=43.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=41.3]; Integrase core domain [PF00665.28, score=30.0]; Integrase core domain [PF13683.8, score=20.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=63.2, Expect=7e-10]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=130, Expect=1e-34]} {RNA1509_52470} {RNA1310_7413} {RNA815_52703}

Cumulative graph for MligTC455_20825

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_20825

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation