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Results for MligTC455_22108

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22108 4 0.08 Mlig455_057403

Neo: -

Age: Up-Down-Down

RTL1 Mlig455_057403 {REF} {Length: 4261} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=59.4]; Integrase zinc binding domain [PF17921.3, score=48.1]; Integrase core domain [PF00665.28, score=41.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=29.1]; H2C2 zinc finger [PF09337.12, score=24.0]; Aspartyl protease [PF13650.8, score=23.6]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=3e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=3e-17]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=231, Expect=3e-62]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_6067.1}

Cumulative graph for MligTC455_22108

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_22108

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

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