TomoSeq data search

Data search

Results for MligTC455_22110

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22110	7	0.15	Mlig455_070381	Neo: - Age: -		Mlig455_070381 {REF} {Length: 1719} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=68.9, Expect=6e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=68.9, Expect=6e-12]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=131, Expect=6e-35]} {RNA1509_57080} {RNA1310_4777.1} {RNA815_2898}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22110

0.15

Mlig455_070381

Neo: -

Age: -

Mlig455_070381 {REF} {Length: 1719} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=68.9, Expect=6e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=68.9, Expect=6e-12]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=131, Expect=6e-35]} {RNA1509_57080} {RNA1310_4777.1} {RNA815_2898}

Cumulative graph for MligTC455_22110

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_22110

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation