Data search
Results for MligTC455_22116
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22116 | 0 | 0 | Mlig455_018416 | Neo: - Age: - |
Mlig455_018416 {REF} {Length: 1451} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.7]; Integrase core domain [PF00665.28, score=31.5]; Integrase core domain [PF13683.8, score=18.8]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=81.3, Expect=1e-15]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=81.3, Expect=1e-15]} {Smed: dd_Smed_v6_24988_0_1, dd_Smed_v6_24988_0_1, [Score=171, Expect=2e-49]} {RNA1509_57080} {RNA1310_6076.2} {RNA815_2898} |
Cumulative graph for MligTC455_22116
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_22116
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|
Berezikov Lab - 2020-2021 © ERIBA