TomoSeq data search

Data search

Results for MligTC455_23079

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23079	3	0.07	Mlig455_037279	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.112	CUBN	Mlig455_037279 {REF} {Length: 1389} {Pfam: EGF-like domain [PF00008.29, score=33.5]; EGF-like domain [PF07974.15, score=20.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=57.8, Expect=3e-09]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=54.7, Expect=2e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=53.1, Expect=7e-08]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=53.5, Expect=3e-08]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [Score=45.1, Expect=1e-05]} {RNA1509_38266} {RNA1310_33374} {RNA815_9585.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23079

0.07

Mlig455_037279

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.112

CUBN

Mlig455_037279 {REF} {Length: 1389} {Pfam: EGF-like domain [PF00008.29, score=33.5]; EGF-like domain [PF07974.15, score=20.6]} {Human: ENSG00000107611, CUBN, cubilin, [Score=57.8, Expect=3e-09]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=54.7, Expect=2e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=53.1, Expect=7e-08]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=53.5, Expect=3e-08]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [Score=45.1, Expect=1e-05]} {RNA1509_38266} {RNA1310_33374} {RNA815_9585.2}

Cumulative graph for MligTC455_23079

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_23079

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation