TomoSeq data search

Data search

Results for MligTC455_23226

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23226	11	0.23	Mlig455_017649	Neo: - Age: -	NYNRIN	Mlig455_017649 {REF} {Length: 3052} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=89.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=77.2]; Integrase zinc binding domain [PF17921.3, score=73.1]; Integrase core domain [PF00665.28, score=40.6]; H2C2 zinc finger [PF09337.12, score=28.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.5, Expect=2e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=93.6, Expect=7e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=298, Expect=4e-87]} {RNA1509_59937} {RNA1310_59808, RNA1509_59937} {RNA1509_59937, RNA815_9021.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23226

0.23

Mlig455_017649

Neo: -

Age: -

NYNRIN

Mlig455_017649 {REF} {Length: 3052} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=89.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=77.2]; Integrase zinc binding domain [PF17921.3, score=73.1]; Integrase core domain [PF00665.28, score=40.6]; H2C2 zinc finger [PF09337.12, score=28.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.5, Expect=2e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=93.6, Expect=7e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=298, Expect=4e-87]} {RNA1509_59937} {RNA1310_59808, RNA1509_59937} {RNA1509_59937, RNA815_9021.1}

Cumulative graph for MligTC455_23226

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_23226

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation