TomoSeq data search

Data search

Results for MligTC455_23361

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_23361	1	0.02	Mlig455_061167	Neo: - Age: -		Mlig455_061167 {REF} {Length: 2804} {Pfam: Integrase core domain [PF00665.28, score=55.9]; Integrase zinc binding domain [PF17921.3, score=53.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=37.6]; Aspartyl protease [PF13650.8, score=24.5]; Integrase core domain [PF13683.8, score=18.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=131, Expect=4e-31]} {RNA1310_24257.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23361

0.02

Mlig455_061167

Neo: -

Age: -

Mlig455_061167 {REF} {Length: 2804} {Pfam: Integrase core domain [PF00665.28, score=55.9]; Integrase zinc binding domain [PF17921.3, score=53.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=37.6]; Aspartyl protease [PF13650.8, score=24.5]; Integrase core domain [PF13683.8, score=18.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=131, Expect=4e-31]} {RNA1310_24257.1}

Cumulative graph for MligTC455_23361

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_23361

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation