Data search


search
Exact
Search

Results for MligTC455_25846

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25846 5 0.10 Mlig455_029483, Mlig455_049728

Neo: -

Age: Down-Up-Down

SETMAR

Mlig455_029483 {REF} {Length: 1483} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=50.9]; HTH domain in Mos1 transposase [PF17906.3, score=32.7]; Homeodomain-like domain [PF13565.8, score=29.2]; DDE superfamily endonuclease [PF13358.8, score=28.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=183, Expect=2e-52]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=90.5, Expect=2e-21]} {RNA1509_33257} {RNA1310_5245.1} {RNA815_6918}

Mlig455_049728 {REF} {Length: 2211} {Pfam: Class II histocompatibility antigen, alpha domain [PF00993.22, score=18.8]} {RNA1509_33257} {RNA1310_11684} {RNA815_6918}

Cumulative graph for MligTC455_25846

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_25846

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA