TomoSeq data search

Data search

Results for MligTC455_26444

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26444	20	0.42	Mlig455_062048	Neo: - Age: -		Mlig455_062048 {REF} {Length: 8325} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=120.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.8]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=81.6, Expect=3e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=81.6, Expect=3e-15]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=214, Expect=2e-57]} {RNA1509_27781} {RNA1310_1378.1} {RNA815_397.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26444

0.42

Mlig455_062048

Neo: -

Age: -

Mlig455_062048 {REF} {Length: 8325} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=120.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.8]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=81.6, Expect=3e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=81.6, Expect=3e-15]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=214, Expect=2e-57]} {RNA1509_27781} {RNA1310_1378.1} {RNA815_397.1}

Cumulative graph for MligTC455_26444

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.786	0.79	0.99996	1.00000
RegionR2	1.233	0.79	1.00000	1.00000
RegionR3	1.028	0.79	0.99996	1.00000
RegionR4	-0.595	0.79	0.99991	1.00000
RegionR5	0.733	0.79	1.00000	1.00000
RegionR6	0.796	0.79	0.99997	1.00000
RegionR7	0.295	0.79	0.99997	1.00000
RegionR8	-0.704	0.79	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.875	0.79	0.99999	1.00000
RegenerationR2	2.958	0.79	0.05200	0.37620
RegenerationR3	2.456	0.79	0.21334	0.64924
RegenerationR4	2.728	0.79	0.12091	0.52968
RegenerationR5	3.353	0.79	0.04020	0.33037
RegenerationR6	3.732	0.79	0.07578	0.34419
RegenerationBL	1.271	0.79	0.55687	0.91249
RegenerationTP	5.105	0.79	0.07010	0.42449

Genes with expression patterns similar to MligTC455_26444

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation