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Results for MligTC455_26613

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26613	22	0.46	Mlig455_003199, Mlig455_003300, Mlig455_004366	Neo: - Age: -	NYNRIN, RTL1	Mlig455_003199 {REF} {Length: 4584} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]; Integrase core domain [PF00665.28, score=40.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.5]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.1, Expect=2e-06]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=186, Expect=3e-50]} {RNA1509_24311} {RNA1310_18677.1} {RNA815_7655.1} Mlig455_003300 {REF} {Length: 2630} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.5]; Integrase core domain [PF00665.28, score=48.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=60.8, Expect=1e-08]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=191, Expect=7e-52]} {RNA1509_24311} {RNA1310_35472} {RNA815_49943} Mlig455_004366 {REF} {Length: 2966} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.5]; Integrase zinc binding domain [PF17921.3, score=48.9]; Integrase core domain [PF00665.28, score=44.6]; H2C2 zinc finger [PF09337.12, score=19.9]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=90.1, Expect=1e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=3e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=347, Expect=1e-103]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26613

0.46

Mlig455_003199, Mlig455_003300, Mlig455_004366

Neo: -

Age: -

NYNRIN, RTL1

Mlig455_003199 {REF} {Length: 4584} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]; Integrase core domain [PF00665.28, score=40.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.5]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.1, Expect=2e-06]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=186, Expect=3e-50]} {RNA1509_24311} {RNA1310_18677.1} {RNA815_7655.1}

Mlig455_003300 {REF} {Length: 2630} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.5]; Integrase core domain [PF00665.28, score=48.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=60.8, Expect=1e-08]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=191, Expect=7e-52]} {RNA1509_24311} {RNA1310_35472} {RNA815_49943}

Mlig455_004366 {REF} {Length: 2966} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.5]; Integrase zinc binding domain [PF17921.3, score=48.9]; Integrase core domain [PF00665.28, score=44.6]; H2C2 zinc finger [PF09337.12, score=19.9]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=90.1, Expect=1e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=3e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=347, Expect=1e-103]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943}

Cumulative graph for MligTC455_26613

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_26613

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation