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Results for MligTC455_26617

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_26617	1	0.02	Mlig455_004280, Mlig455_018851, Mlig455_060088, Mlig455_068930	Neo: - Age: -	NYNRIN, RTL1	Mlig455_004280 {REF} {Length: 2966} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.5]; Integrase zinc binding domain [PF17921.3, score=48.9]; Integrase core domain [PF00665.28, score=44.6]; H2C2 zinc finger [PF09337.12, score=19.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=87.4, Expect=8e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=3e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=346, Expect=2e-103]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943} Mlig455_018851 {REF} {Length: 3308} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=90.3]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=43.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.5]; H2C2 zinc finger [PF09337.12, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.7, Expect=8e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=3e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=6e-76]} {RNA1509_24311} {RNA1310_35472} Mlig455_060088 {REF} {Length: 2807} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=212, Expect=5e-59]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943} Mlig455_068930 {REF} {Length: 3062} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=89.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.8]; Integrase zinc binding domain [PF17921.3, score=51.9]; Integrase core domain [PF00665.28, score=48.3]; H2C2 zinc finger [PF09337.12, score=20.0]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.3, Expect=1e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.7, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=290, Expect=8e-83]} {RNA1509_24311} {RNA1310_35472} {RNA815_49943}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_26617

0.02

Mlig455_004280, Mlig455_018851, Mlig455_060088, Mlig455_068930

Neo: -

Age: -

NYNRIN, RTL1

Mlig455_004280 {REF} {Length: 2966} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.5]; Integrase zinc binding domain [PF17921.3, score=48.9]; Integrase core domain [PF00665.28, score=44.6]; H2C2 zinc finger [PF09337.12, score=19.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=87.4, Expect=8e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=3e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=346, Expect=2e-103]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943}

Mlig455_018851 {REF} {Length: 3308} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=90.3]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=43.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.5]; H2C2 zinc finger [PF09337.12, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.7, Expect=8e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=3e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=6e-76]} {RNA1509_24311} {RNA1310_35472}

Mlig455_060088 {REF} {Length: 2807} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.1]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=212, Expect=5e-59]} {RNA1509_24311} {RNA1310_3864} {RNA815_49943}

Mlig455_068930 {REF} {Length: 3062} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=89.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.8]; Integrase zinc binding domain [PF17921.3, score=51.9]; Integrase core domain [PF00665.28, score=48.3]; H2C2 zinc finger [PF09337.12, score=20.0]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.3, Expect=1e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.7, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=290, Expect=8e-83]} {RNA1509_24311} {RNA1310_35472} {RNA815_49943}

Cumulative graph for MligTC455_26617

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_26617

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation