TomoSeq data search

Data search

Results for MligTC455_27197

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27197	1	0.03	Mlig455_026093	Neo: - Age: -	NYNRIN	Mlig455_026093 {REF} {Length: 1802} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.2]; Integrase core domain [PF00665.28, score=51.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=42.6]; H2C2 zinc finger [PF09337.12, score=21.7]; DDE superfamily endonuclease [PF13358.8, score=20.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.9, Expect=7e-07]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.8, Expect=1e-06]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=99.0, Expect=3e-22]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_4875.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27197

0.03

Mlig455_026093

Neo: -

Age: -

NYNRIN

Mlig455_026093 {REF} {Length: 1802} {Pfam: Integrase zinc binding domain [PF17921.3, score=58.2]; Integrase core domain [PF00665.28, score=51.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=42.6]; H2C2 zinc finger [PF09337.12, score=21.7]; DDE superfamily endonuclease [PF13358.8, score=20.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.9, Expect=7e-07]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=52.8, Expect=1e-06]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=99.0, Expect=3e-22]} {RNA1509_60111} {RNA1310_1717.1} {RNA815_4875.1}

Cumulative graph for MligTC455_27197

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27197

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation