TomoSeq data search

Data search

Results for MligTC455_27368

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27368	6	0.13	Mlig455_053582	Neo: - Age: -	PCDH19	Mlig455_053582 {REF} {Length: 3131} {Pfam: Cadherin domain [PF00028.19, score=246.8]; Cadherin-like [PF08266.14, score=28.7]; Cadherin-like [PF16184.7, score=20.3]} {Human: ENSG00000165194, PCDH19, protocadherin 19, [RH, Score=276, Expect=7e-78]} {Mouse: ENSMUSG00000051323, Pcdh19, protocadherin 19, [RH, Score=276, Expect=5e-78]} {Dmel: FBgn0001075, ft, fat, [Score=230, Expect=8e-62]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=2e-43]} {Smed: dd_Smed_v6_14117_0_1, dd_Smed_v6_14117_0_1, [Score=278, Expect=4e-79]}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27368

0.13

Mlig455_053582

Neo: -

Age: -

PCDH19

Mlig455_053582 {REF} {Length: 3131} {Pfam: Cadherin domain [PF00028.19, score=246.8]; Cadherin-like [PF08266.14, score=28.7]; Cadherin-like [PF16184.7, score=20.3]} {Human: ENSG00000165194, PCDH19, protocadherin 19, [RH, Score=276, Expect=7e-78]} {Mouse: ENSMUSG00000051323, Pcdh19, protocadherin 19, [RH, Score=276, Expect=5e-78]} {Dmel: FBgn0001075, ft, fat, [Score=230, Expect=8e-62]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=172, Expect=2e-43]} {Smed: dd_Smed_v6_14117_0_1, dd_Smed_v6_14117_0_1, [Score=278, Expect=4e-79]}

Cumulative graph for MligTC455_27368

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27368

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation