TomoSeq data search

Data search

Results for MligTC455_27977

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27977	74	1.55	Mlig455_018939	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.575	COL12A1	Mlig455_018939 {REF} {Length: 1490} {Pfam: von Willebrand factor type A domain [PF00092.30, score=104.4]; von Willebrand factor type A domain [PF13519.8, score=46.0]; von Willebrand factor type A domain [PF13768.8, score=22.3]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=75.1, Expect=9e-14]} {Celegans: WBGene00003482, mua-3, Transmembrane cell adhesion receptor mua-3, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_2674_0_1, dd_Smed_v6_2674_0_1, [Score=70.5, Expect=8e-13]} {RNA1509_17763} {RNA1310_8996} {RNA815_2915.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27977

1.55

Mlig455_018939

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.575

COL12A1

Mlig455_018939 {REF} {Length: 1490} {Pfam: von Willebrand factor type A domain [PF00092.30, score=104.4]; von Willebrand factor type A domain [PF13519.8, score=46.0]; von Willebrand factor type A domain [PF13768.8, score=22.3]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000043719, Col6a6, collagen, type VI, alpha 6, [Score=75.1, Expect=9e-14]} {Celegans: WBGene00003482, mua-3, Transmembrane cell adhesion receptor mua-3, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_2674_0_1, dd_Smed_v6_2674_0_1, [Score=70.5, Expect=8e-13]} {RNA1509_17763} {RNA1310_8996} {RNA815_2915.1}

Cumulative graph for MligTC455_27977

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_27977

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation