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Results for MligTC455_29731

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29731 0 0.00 Mlig455_014239, Mlig455_034697

Neo: -

Age: -

RTL1

Mlig455_014239 {REF} {Length: 3455} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=117.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=79.9]; Integrase zinc binding domain [PF17921.3, score=63.4]; Integrase core domain [PF00665.28, score=46.5]; H2C2 zinc finger [PF09337.12, score=24.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=107, Expect=1e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=89.4, Expect=2e-17]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=305, Expect=2e-87]} {RNA1509_41793} {RNA1310_4276} {RNA815_38821}

Mlig455_034697 {REF} {Length: 2663} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.4]; Integrase zinc binding domain [PF17921.3, score=19.0]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=105, Expect=2e-22]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=274, Expect=3e-78]} {RNA1509_41793} {RNA1310_4276} {RNA815_25818}

Cumulative graph for MligTC455_29731

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_29731

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

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