TomoSeq data search

Data search

Results for MligTC455_29746

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29746	1	0.02	Mlig455_030168	Neo: - Age: -	URGCP	Mlig455_030168 {REF} {Length: 1079} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=31.8]; Dynamin family [PF00350.25, score=25.1]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=21.6]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=214, Expect=9e-62]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=214, Expect=1e-61]} {RNA1509_16396} {RNA1310_766.1} {RNA815_1275.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29746

0.02

Mlig455_030168

Neo: -

Age: -

URGCP

Mlig455_030168 {REF} {Length: 1079} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=31.8]; Dynamin family [PF00350.25, score=25.1]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=21.6]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=214, Expect=9e-62]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=214, Expect=1e-61]} {RNA1509_16396} {RNA1310_766.1} {RNA815_1275.1}

Cumulative graph for MligTC455_29746

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_29746

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation