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Results for MligTC455_29946

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29946 0 0.00 Mlig455_046408, Mlig455_057324, Mlig455_069501

Neo: -

Age: Up-Down-Up

NYNRIN

Mlig455_046408 {REF} {Length: 3626} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.5]; Integrase core domain [PF00665.28, score=84.9]; Integrase zinc binding domain [PF17921.3, score=54.6]; Integrase core domain [PF13683.8, score=40.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.2]; H2C2 zinc finger [PF09337.12, score=26.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.9]; Aspartyl protease [PF13650.8, score=20.8]; Domain of unknown function (DUF4537) [PF15057.8, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=53.1, Expect=4e-06]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=4e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=4e-17]} {Celegans: WBGene00019335, K02F6.1, [Score=50.4, Expect=8e-06]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=234, Expect=3e-63]} {RNA1509_51271} {RNA1310_6932} {RNA815_14765}

Mlig455_057324 {REF} {Length: 899} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=33.2]; Aspartyl protease [PF13650.8, score=28.3]; Retroviral aspartyl protease [PF00077.22, score=25.3]} {RNA1509_6282} {RNA1310_617} {RNA815_1602}

Mlig455_069501 {REF} {Length: 1738} {Pfam: Integrase core domain [PF00665.28, score=55.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=31.5]; Aspartyl protease [PF13650.8, score=26.9]; Retroviral aspartyl protease [PF00077.22, score=24.9]; Integrase core domain [PF13683.8, score=19.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=50.4, Expect=9e-06]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=100, Expect=2e-22]} {RNA1509_6282} {RNA1310_617} {RNA815_1602}

Cumulative graph for MligTC455_29946

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_29946

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

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