TomoSeq data search

Data search

Results for MligTC455_30631

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30631	3	0.07	Mlig455_006143, Mlig455_006152, Mlig455_006153, Mlig455_032852	Neo: Irradiation Age: Up-Down-Down		Mlig455_006143 {REF} {Length: 1793} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]} {Smed: dd_Smed_v6_70328_0_1, dd_Smed_v6_70328_0_1, [RH, Score=50.4, Expect=7e-08]} {RNA1509_28305} {RNA1310_29834} {RNA815_14617} Mlig455_006152 {REF} {Length: 885} {RNA1509_28305} {RNA1310_29834} {RNA815_14617} Mlig455_006153 {REF} {Length: 377} {Pfam: F5/8 type C domain [PF00754.27, score=28.1]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=49.7, Expect=1e-08]} Mlig455_032852 {REF} {Length: 1663} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]} {Smed: dd_Smed_v6_70328_0_1, dd_Smed_v6_70328_0_1, [Score=48.9, Expect=2e-07]} {RNA1509_28305} {RNA1310_29834} {RNA815_14617}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30631

0.07

Mlig455_006143, Mlig455_006152, Mlig455_006153, Mlig455_032852

Neo: Irradiation

Age: Up-Down-Down

Mlig455_006143 {REF} {Length: 1793} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]} {Smed: dd_Smed_v6_70328_0_1, dd_Smed_v6_70328_0_1, [RH, Score=50.4, Expect=7e-08]} {RNA1509_28305} {RNA1310_29834} {RNA815_14617}

Mlig455_006152 {REF} {Length: 885} {RNA1509_28305} {RNA1310_29834} {RNA815_14617}

Mlig455_006153 {REF} {Length: 377} {Pfam: F5/8 type C domain [PF00754.27, score=28.1]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=49.7, Expect=1e-08]}

Mlig455_032852 {REF} {Length: 1663} {Pfam: F5/8 type C domain [PF00754.27, score=26.0]} {Smed: dd_Smed_v6_70328_0_1, dd_Smed_v6_70328_0_1, [Score=48.9, Expect=2e-07]} {RNA1509_28305} {RNA1310_29834} {RNA815_14617}

Cumulative graph for MligTC455_30631

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_30631

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation