TomoSeq data search

Data search

Results for MligTC455_30681

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30681	0	0.01	Mlig455_066021	Neo: - Age: -		Mlig455_066021 {REF} {Length: 3134} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.5]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=44.8]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=88.2, Expect=4e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=5e-76]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30681

0.01

Mlig455_066021

Neo: -

Age: -

Mlig455_066021 {REF} {Length: 3134} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.5]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=44.8]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=88.2, Expect=4e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=5e-76]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}

Cumulative graph for MligTC455_30681

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_30681

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation