TomoSeq data search

Data search

Results for MligTC455_31139

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31139	14	0.28	Mlig455_038654	Neo: - Age: -	TRPM1	Mlig455_038654 {REF} {Length: 4917} {Pfam: Ion transport protein [PF00520.33, score=49.8]; Polycystin cation channel [PF08016.14, score=34.9]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=212, Expect=4e-57]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=212, Expect=3e-57]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=207, Expect=1e-55]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=204, Expect=1e-54]; ENSMUSG00000009246, Trpm5, transient receptor potential cation channel, subfamily M, member 5, [Score=199, Expect=5e-53]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=177, Expect=6e-46]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=126, Expect=9e-30]} {Smed: dd_Smed_v6_17857_0_1, dd_Smed_v6_17857_0_1, [Score=368, Expect=2e-113]} {RNA1509_58484} {RNA1310_25429} {RNA815_24561}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31139

0.28

Mlig455_038654

Neo: -

Age: -

TRPM1

Mlig455_038654 {REF} {Length: 4917} {Pfam: Ion transport protein [PF00520.33, score=49.8]; Polycystin cation channel [PF08016.14, score=34.9]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=212, Expect=4e-57]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=212, Expect=3e-57]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=207, Expect=1e-55]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=204, Expect=1e-54]; ENSMUSG00000009246, Trpm5, transient receptor potential cation channel, subfamily M, member 5, [Score=199, Expect=5e-53]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=177, Expect=6e-46]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=126, Expect=9e-30]} {Smed: dd_Smed_v6_17857_0_1, dd_Smed_v6_17857_0_1, [Score=368, Expect=2e-113]} {RNA1509_58484} {RNA1310_25429} {RNA815_24561}

Cumulative graph for MligTC455_31139

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.289	0.623	1.00000	1.00000
RegionR2	-1.124	0.623	0.99903	1.00000
RegionR3	-0.021	0.623	1.00000	1.00000
RegionR4	1.9	0.623	1.00000	1.00000
RegionR5	0.722	0.623	0.99950	1.00000
RegionR6	0.174	0.623	0.99951	1.00000
RegionR7	-0.506	0.623	0.99949	1.00000
RegionR8	-0.856	0.623	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.231	0.623	0.99928	1.00000
RegenerationR2	2.555	0.623	0.41883	0.82652
RegenerationR3	2.245	0.623	0.67962	0.94017
RegenerationR4	1.629	0.623	0.83635	0.99935
RegenerationR5	1.354	0.623	0.68114	0.94415
RegenerationR6	1.715	0.623	0.61744	0.87921
RegenerationBL	2.819	0.623	0.36275	0.73159
RegenerationTP	-0.209	0.623	0.99952	1.00000

Genes with expression patterns similar to MligTC455_31139

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation