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Results for MligTC455_32732

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32732 4 0.09 Mlig455_003025, Mlig455_025133, Mlig455_040100, Mlig455_054287

Neo: -

Age: Up-Down-Up

Mlig455_003025 {REF} {Length: 716} {Pfam: zinc-binding in reverse transcriptase [PF13966.8, score=20.6]} {RNA1509_53138} {RNA1310_21300}

Mlig455_025133 {REF} {Length: 4679} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=139.3]; Endonuclease-reverse transcriptase [PF14529.8, score=58.7]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=31.1]} {Mouse: ENSMUSG00000090353, Gm17555, predicted gene, 17555, [RH, Score=50.8, Expect=5e-06]; ENSMUSG00000094472, Gm21897, predicted gene, 21897, [RH, Score=50.1, Expect=1e-05]; ENSMUSG00000096463, Gm21750, predicted gene, 21750, [RH, Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_19123_0_4, dd_Smed_v6_19123_0_4, [Score=54.3, Expect=2e-07]} {RNA1509_53138} {RNA1310_21300}

Mlig455_040100 {REF} {Length: 3086} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=139.0]; Endonuclease-reverse transcriptase [PF14529.8, score=27.0]} {Smed: dd_Smed_v6_19123_0_8, dd_Smed_v6_19123_0_8, [Score=55.1, Expect=1e-07]} {RNA1509_53138} {RNA1310_44622} {RNA815_59456}

Mlig455_054287 {REF} {Length: 2945} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.2]; Endonuclease-reverse transcriptase [PF14529.8, score=53.1]} {RNA1509_53138} {RNA1310_21300}

Cumulative graph for MligTC455_32732

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_32732

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation

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