TomoSeq data search

Data search

Results for MligTC455_33081

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33081	0	0.00	Mlig455_062291	Neo: - Age: Down-Up-Down, logFC(26M/2M)=3.327	MMP2	Mlig455_062291 {REF} {Length: 1804} {Pfam: Fibronectin type II domain [PF00040.21, score=70.5]; Calcium-binding EGF domain [PF07645.17, score=28.1]} {Human: ENSG00000087245, MMP2, matrix metallopeptidase 2, [Score=58.5, Expect=8e-09]} {Mouse: ENSMUSG00000017737, Mmp9, matrix metallopeptidase 9, [Score=60.8, Expect=1e-09]; ENSMUSG00000031740, Mmp2, matrix metallopeptidase 2, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00007170, B0393.5, [Score=50.4, Expect=1e-06]} {RNA1509_9115} {RNA1310_32646.1} {RNA815_14924.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33081

0.00

Mlig455_062291

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=3.327

MMP2

Mlig455_062291 {REF} {Length: 1804} {Pfam: Fibronectin type II domain [PF00040.21, score=70.5]; Calcium-binding EGF domain [PF07645.17, score=28.1]} {Human: ENSG00000087245, MMP2, matrix metallopeptidase 2, [Score=58.5, Expect=8e-09]} {Mouse: ENSMUSG00000017737, Mmp9, matrix metallopeptidase 9, [Score=60.8, Expect=1e-09]; ENSMUSG00000031740, Mmp2, matrix metallopeptidase 2, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00007170, B0393.5, [Score=50.4, Expect=1e-06]} {RNA1509_9115} {RNA1310_32646.1} {RNA815_14924.1}

Cumulative graph for MligTC455_33081

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_33081

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation