TomoSeq data search

Data search

Results for MligTC455_33233

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33233	0	0	Mlig455_000965	Neo: - Age: -	NYNRIN	Mlig455_000965 {REF} {Length: 2711} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.2]; Integrase zinc binding domain [PF17921.3, score=51.9]; Integrase core domain [PF00665.28, score=46.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=81.6, Expect=5e-15]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=74.7, Expect=5e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=227, Expect=7e-62]} {RNA1509_24311} {RNA1310_34127.1} {RNA815_49943}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33233

Mlig455_000965

Neo: -

Age: -

NYNRIN

Mlig455_000965 {REF} {Length: 2711} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.2]; Integrase zinc binding domain [PF17921.3, score=51.9]; Integrase core domain [PF00665.28, score=46.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=81.6, Expect=5e-15]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=74.7, Expect=5e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=227, Expect=7e-62]} {RNA1509_24311} {RNA1310_34127.1} {RNA815_49943}

Cumulative graph for MligTC455_33233

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_33233

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation