TomoSeq data search

Data search

Results for MligTC455_33235

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33235	1	0.03	Mlig455_067930	Neo: - Age: -		Mlig455_067930 {REF} {Length: 3944} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=54.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=35.0]; Phage integrase family [PF00589.24, score=20.6]; Viral RNA-dependent RNA polymerase [PF00680.22, score=18.3]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=190, Expect=4e-51]} {RNA1509_24311} {RNA1310_18677.2} {RNA815_21479}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33235

0.03

Mlig455_067930

Neo: -

Age: -

Mlig455_067930 {REF} {Length: 3944} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=54.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=35.0]; Phage integrase family [PF00589.24, score=20.6]; Viral RNA-dependent RNA polymerase [PF00680.22, score=18.3]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=190, Expect=4e-51]} {RNA1509_24311} {RNA1310_18677.2} {RNA815_21479}

Cumulative graph for MligTC455_33235

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_33235

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation