TomoSeq data search

Data search

Results for MligTC455_34174

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34174	17	0.35	Mlig455_026898, Mlig455_059153	Neo: - Age: Down-Up-Down	GVQW3	Mlig455_026898 {REF} {Length: 1025} {Pfam: Homeodomain-like domain [PF13384.8, score=34.2]; Homeodomain-like domain [PF13565.8, score=31.2]; Winged helix-turn-helix DNA-binding [PF13412.8, score=30.7]; IclR helix-turn-helix domain [PF09339.12, score=28.6]; HTH domain in Mos1 transposase [PF17906.3, score=28.3]; Winged helix-turn helix [PF13551.8, score=25.8]; AsnC-type helix-turn-helix domain [PF13404.8, score=24.0]; Helix-turn-helix domain [PF13936.8, score=23.1]; Bacterial regulatory protein, arsR family [PF01022.22, score=20.4]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=58.9, Expect=6e-11]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_752.1} Mlig455_059153 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13384.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=31.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=30.7]; IclR helix-turn-helix domain [PF09339.12, score=28.6]; HTH domain in Mos1 transposase [PF17906.3, score=28.6]; Winged helix-turn helix [PF13551.8, score=25.8]; Helix-turn-helix domain [PF13936.8, score=24.8]; AsnC-type helix-turn-helix domain [PF13404.8, score=24.0]; Bacterial regulatory protein, arsR family [PF01022.22, score=20.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=58.9, Expect=3e-11]} {RNA1509_57191} {RNA1310_51318.1} {RNA815_10095.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34174

0.35

Mlig455_026898, Mlig455_059153

Neo: -

Age: Down-Up-Down

GVQW3

Mlig455_026898 {REF} {Length: 1025} {Pfam: Homeodomain-like domain [PF13384.8, score=34.2]; Homeodomain-like domain [PF13565.8, score=31.2]; Winged helix-turn-helix DNA-binding [PF13412.8, score=30.7]; IclR helix-turn-helix domain [PF09339.12, score=28.6]; HTH domain in Mos1 transposase [PF17906.3, score=28.3]; Winged helix-turn helix [PF13551.8, score=25.8]; AsnC-type helix-turn-helix domain [PF13404.8, score=24.0]; Helix-turn-helix domain [PF13936.8, score=23.1]; Bacterial regulatory protein, arsR family [PF01022.22, score=20.4]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=58.9, Expect=6e-11]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_752.1}

Mlig455_059153 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13384.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=31.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=30.7]; IclR helix-turn-helix domain [PF09339.12, score=28.6]; HTH domain in Mos1 transposase [PF17906.3, score=28.6]; Winged helix-turn helix [PF13551.8, score=25.8]; Helix-turn-helix domain [PF13936.8, score=24.8]; AsnC-type helix-turn-helix domain [PF13404.8, score=24.0]; Bacterial regulatory protein, arsR family [PF01022.22, score=20.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=58.9, Expect=3e-11]} {RNA1509_57191} {RNA1310_51318.1} {RNA815_10095.1}

Cumulative graph for MligTC455_34174

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.172	0.628	0.99986	1.00000
RegionR2	3.009	0.628	0.99987	1.00000
RegionR3	0.901	0.628	1.00000	1.00000
RegionR4	-2.783	0.628	0.99979	1.00000
RegionR5	-0.342	0.628	0.99982	1.00000
RegionR6	0.353	0.628	0.99989	1.00000
RegionR7	1.093	0.628	0.99992	1.00000
RegionR8	0.942	0.628	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.058	0.628	0.99986	1.00000
RegenerationR2	-0.035	0.628	0.99991	1.00000
RegenerationR3	1.721	0.628	1.00000	1.00000
RegenerationR4	2.198	0.628	0.99959	1.00000
RegenerationR5	1.901	0.628	0.99951	1.00000
RegenerationR6	1.809	0.628	0.99978	1.00000
RegenerationBL	1.189	0.628	0.99989	1.00000
RegenerationTP	3.08	0.628	0.99976	1.00000

Genes with expression patterns similar to MligTC455_34174

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation