TomoSeq data search

Data search

Results for MligTC455_35421

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35421	20	0.41	Mlig455_026284	Neo: - Age: Down-Up-Down	TRAF3	Mlig455_026284 {REF} {Length: 3122} {Pfam: Seven in absentia protein family [PF03145.18, score=35.4]; TRAF-type zinc finger [PF02176.20, score=24.3]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=130, Expect=3e-31]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=132, Expect=5e-32]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=81.3, Expect=7e-16]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=70.9, Expect=9e-13]} {Smed: dd_Smed_v6_1139_0_3, dd_Smed_v6_1139_0_3, [Score=79.3, Expect=1e-15]} {RNA1509_52151} {RNA1310_5165} {RNA815_12222}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35421

0.41

Mlig455_026284

Neo: -

Age: Down-Up-Down

TRAF3

Mlig455_026284 {REF} {Length: 3122} {Pfam: Seven in absentia protein family [PF03145.18, score=35.4]; TRAF-type zinc finger [PF02176.20, score=24.3]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=130, Expect=3e-31]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=132, Expect=5e-32]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=81.3, Expect=7e-16]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=70.9, Expect=9e-13]} {Smed: dd_Smed_v6_1139_0_3, dd_Smed_v6_1139_0_3, [Score=79.3, Expect=1e-15]} {RNA1509_52151} {RNA1310_5165} {RNA815_12222}

Cumulative graph for MligTC455_35421

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.657	0.699	0.99996	1.00000
RegionR2	0.668	0.699	0.99981	1.00000
RegionR3	0.699	0.699	0.99978	1.00000
RegionR4	0.94	0.699	1.00000	1.00000
RegionR5	-1.186	0.699	1.00000	1.00000
RegionR6	-1.433	0.699	1.00000	1.00000
RegionR7	-1.051	0.699	0.99986	1.00000
RegionR8	0.705	0.699	0.99993	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.49	0.699	1.00000	1.00000
RegenerationR2	-1.754	0.699	0.03146	0.29100
RegenerationR3	-3.348	0.699	0.99977	1.00000
RegenerationR4	-3.633	0.699	0.02916	0.27503
RegenerationR5	0.361	0.699	0.98192	1.00000
RegenerationR6	-0.675	0.699	0.78200	0.96848
RegenerationBL	-3.645	0.699	0.99982	1.00000
RegenerationTP	-2.383	0.699	0.99988	1.00000

Genes with expression patterns similar to MligTC455_35421

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation